Links to example Data sets for ER

Images for "Reflections of Organization: How the organization of the cell determines the organization of the organ and organism.

Animal ER: Tif File Avi File

Cell type fluorescent data bright field data

Time Lapse

hypocotyl

Tif file

AVI file

Tif file

AVI file

3D

hypocotyl

Tif file

AVI file

Tif file

AVI file

3D epidermal

Root

Tif file

AVI file

Tif file

AVI file

3D Epidermal

Leaf, time 1

Tif file

AVI file

Tif file

AVI file

3D Epidermal

Leaf time 2

Tif file

AVI file

Tif file

AVI file

Time Lapse

Root

Tif file

AVI file

Tif file

AVI file

3D

Leaf Hair

Tif file

AVI file

Tif file

AVI file

Time Lapse

Leaf Hair

Tif file

AVI file

Tif file

AVI file

3D Epidermal-Mesophyll

Leaf

Tif file

AVI file

Tif file

AVI file

3D

Stomate

Tif file

AVI file

Tif file

AVI file

Time Lapse

Mesophyll

Tif file - chl

Tif file - ER

AVI file - chl

AVI file - ER

Tif file

AVI file

Time Lapse

Root

Tif file

AVI file

Tif file

AVI file

3D

hypocotyl

Tif file

AVI file

Rotation.gif

Tif file

AVI file

3D - farther up the shoot

hypocotyl

Tif file

AVI file

Tif file

AVI file

Time Lapse

hypocotyl

Tif file

AVI file

Tif file

AVI file

Time Lapse

hypocotyl

Tif file

AVI file

Tif file

AVI file

Time Lapse

hypocotyl

Tif file

AVI file

Tif file

AVI file

Time Lapse Leaf

Epidermis

Tif file

AVI file

Tif file

AVI file

Time Lapse Root

Epidermis

Tif file

AVI file

Tif file

AVI file

3D

Stomate

Tif file

AVI file

Tif file

AVI file

 

 

Undergraduate Images: For these images, you will need to use imagej. All of the channels load as 16 bit grayscale TIF files. They vary between 10 and 60 MB per file.

Tuesday - click on the underlined number (1 = DIC, 2 = gfp(green) , 3 = chloroplast (red)

1 2 3 chlplstERhypocotyl

1 2 3 epidermal3zscan.oif

1 2 3 epidermal4zscan.oif

1 2 3 epidermalcell2.oif

1 2 3 epidermalzsec1.oif

1 2 ERhypocotyl.oif

1 2 3 hypocottredchan.oif

2 leafepiderm553sec.oif

1 2 rootstream11min.oif

1 2 wholeroot488.oif

1 2 zscan1.oif

1 2 3 zsecwithchlrorplast.oif

Demo from Thursday - click on link below

1 2 3 hypocotyl11.oif

1 2 3 hypocotyl12.oif

1 2 hypocotyl3.oif

1 2 3 leaf epidermis.oif

1 2 3 leafhair.oif

1 2 3 mesophyllcell1.oif

1 2 root.oif

1 2 3 stomata1.oif

Wednesday Demo

1 2 3 basalcellofleafhair.oif

1 2 3 hypocotyl2.oif

1 2 3 hypocotyleER1.oif

1 2 3 hypocotylER.oif

1 2 justinscan.oif

1 2 leaftime.oif

1 2 leslieroot.oif

1 2 3 sarascan.oif

1 2 3 stomateER.oif